STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114797127Kelch-like protein 41a. (601 aa)    
Predicted Functional Partners:
bbs1
Bardet-Biedl syndrome 1.
    
 0.941
bbs9
Bardet-Biedl syndrome 9.
   
 0.939
bbs4
Bardet-Biedl syndrome 4.
    
 0.934
bbs7
Bardet-Biedl syndrome 7.
   
 0.932
ttc8
Tetratricopeptide repeat domain 8.
   
 0.929
bbs2
Bardet-Biedl syndrome 2.
    
 0.927
ENSDCDP00000011316
BBSome interacting protein 1.
    
 0.833
klhl21
Kelch like family member 21.
  
 
 
0.772
klhl7
Kelch like family member 7.
  
 
 
0.772
lztfl1
Leucine zipper transcription factor like 1.
   
 0.770
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.