STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
setdb1SET domain bifurcated histone lysine methyltransferase 1. (1204 aa)    
Predicted Functional Partners:
LOC114785638
Activating transcription factor 7-interacting protein 1-like.
   
 0.932
atf7ip2
Activating transcription factor 7 interacting protein 2.
   
 0.919
LOC114765017
Uncharacterized LOC114765017.
   
 0.895
arl14ep
ADP ribosylation factor like GTPase 14 effector protein.
    
 
 0.883
camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.876
dot1l
DOT1 like histone lysine methyltransferase.
   
 0.856
cdyl
Chromodomain Y like.
  
 0.854
CDYL2
Chromodomain Y like 2.
  
 0.854
LOC114801138
Histone-lysine N-methyltransferase SETMAR.
    
0.840
LOC114782443
Lysine-specific demethylase 2A-like.
   
 0.834
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.