STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrrc14bLeucine rich repeat containing 14B. (523 aa)    
Predicted Functional Partners:
ENSDCDP00000054901
annotation not available
   
  
 0.531
LOC114799512
Phosphoinositide-3-kinase-interacting protein 1-like.
      
 0.520
lrrc20
Leucine rich repeat containing 20.
      
 0.507
asb16
Ankyrin repeat and SOCS box containing 16.
   
  
 0.483
LOC114783003
Leucine-rich repeat-containing protein 30-like.
   
  
 0.471
LOC114797610
Leucine-rich repeat-containing protein 38-like.
      
 0.468
asb12
Ankyrin repeat and SOCS box containing 12.
   
  
 0.465
tmem38a
Transmembrane protein 38A.
   
  
 0.461
osbpl6
Oxysterol binding protein like 6.
      
 0.459
osbpl7
Oxysterol binding protein like 7.
      
 0.445
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.