STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSDCDP00000011677annotation not available (1552 aa)    
Predicted Functional Partners:
ENSDCDP00000011544
annotation not available
 
     0.885
itgb5
Integrin subunit beta 5.
    
 0.637
itgb4
Integrin subunit beta 4.
   
 0.637
itgb6
Integrin subunit beta 6.
    
 0.633
itgb1
Integrin subunit beta 1.
    
 0.633
itgb7
Integrin subunit beta 7.
    
 0.615
ENSDCDP00000055889
annotation not available
    
 0.613
itga2
Integrin subunit alpha 2.
   
0.605
ENSDCDP00000007219
Collagen, type VI, alpha 1.
   
0.599
itga1
Integrin subunit alpha 1.
    
0.598
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.