STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114775566Transcription factor IIIB 90 kDa subunit-like. (166 aa)    
Predicted Functional Partners:
gtf3c3
General transcription factor IIIC subunit 3.
    
 0.971
polr3b
RNA polymerase III subunit B.
   
 0.954
polr3a
RNA polymerase III subunit A.
   
 0.935
polr1c
RNA polymerase I and III subunit C.
    
 0.919
polr2k
RNA polymerase II subunit K.
    
 0.912
LOC114799524
Transcription factor TFIIIB component B'' homolog.
    
 0.909
LOC114786912
Transcription factor TFIIIB component B'' homolog.
    
 0.909
polr3d
RNA polymerase III subunit D.
    
 0.908
crcp
CGRP receptor component.
    
 0.907
polr3e
RNA polymerase III subunit E.
    
 0.905
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.