STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114775368Tetratricopeptide repeat protein 9C-like. (209 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.973
ak9
Adenylate kinase 9.
   
 0.794
ENSDCDP00000056165
annotation not available
    
 0.789
glyr1
Glyoxylate reductase 1 homolog.
    
 0.782
ENSDCDP00000021720
Si:dkey-96l17.6.
    
 0.749
bbs9
Bardet-Biedl syndrome 9.
    
 0.748
nudt12
Nudix hydrolase 12.
   
  0.745
cdc16
Cell division cycle 16.
    
 0.744
ttc26
Tetratricopeptide repeat domain 26.
   
 0.741
anapc1
Anaphase promoting complex subunit 1.
    
 0.741
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.