STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glod5Glyoxalase domain containing 5. (169 aa)    
Predicted Functional Partners:
ENSDCDP00000047429
TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B.
    
 0.901
ENSDCDP00000005204
annotation not available
    
 0.796
ENSDCDP00000039968
Germ cell nuclear acidic peptidase.
    
 0.796
sgf29
SAGA complex associated factor 29.
   
 
  0.744
rrn3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.734
suox
Sulfite oxidase.
  
  0.728
mnat1
MNAT1 component of CDK activating kinase.
    
 0.727
LOC114796668
Thioredoxin domain-containing protein 3 homolog.
  
 0.718
polr1a
RNA polymerase I subunit A.
   
 0.681
polr2h
RNA polymerase II subunit H.
   
 
  0.665
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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