STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tigarTP53 induced glycolysis regulatory phosphatase. (244 aa)    
Predicted Functional Partners:
pgk1
Phosphoglycerate kinase 1.
  
 0.957
gpi
Glucose-6-phosphate isomerase.
  
 
 0.943
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 0.940
tpi1
Triosephosphate isomerase 1.
  
 0.937
LOC114770122
Triosephosphate isomerase A.
  
 0.937
taldo1
Transaldolase 1.
  
 0.906
LOC114773220
MYCBP-associated protein-like.
  
 0.898
hkdc1
Hexokinase domain containing 1.
   
 0.884
pfkfb3
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3.
   
 0.880
LOC114799018
Hexokinase-2-like.
   
 0.877
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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