STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114775939dnaJ homolog subfamily C member 5-like. (193 aa)    
Predicted Functional Partners:
tfip11
Tuftelin interacting protein 11.
    
 
 0.907
cdc5l
Cell division cycle 5 like.
   
 
 0.900
crnkl1
Crooked neck pre-mRNA splicing factor 1.
    
 
 0.885
plrg1
Pleiotropic regulator 1.
    
   0.882
bud31
BUD31 homolog.
    
   0.881
snw1
SNW domain containing 1.
    
 
 0.854
hspa9
Heat shock protein family A (Hsp70) member 9.
 
 0.854
prpf8
pre-mRNA processing factor 8.
    
   0.844
ENSDCDP00000015362
Heat shock cognate 70-kd protein, tandem duplicate 1.
 
 0.838
HSPA8
ZPR1 zinc finger.
 
 0.837
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.