STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF1DDB1 and CUL4 associated factor 1. (1533 aa)    
Predicted Functional Partners:
ddb1
Damage specific DNA binding protein 1.
    
 0.998
dda1
DET1 and DDB1 associated 1.
    
 0.993
LOC114793696
RING-box protein 1.
    
 0.991
LOC114793901
RING-box protein 1.
    
 0.991
cul4b
Cullin 4B.
   
 0.991
LOC114764581
cullin-4A-like.
   
 0.991
cops5
COP9 signalosome subunit 5.
    
 0.981
COPS6
COP9 signalosome subunit 6.
    
 0.973
cops3
COP9 signalosome subunit 3.
    
 0.972
rnf7
Ring finger protein 7.
    
 0.972
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.