STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
golga4Golgin A4. (2141 aa)    
Predicted Functional Partners:
arl1
ADP ribosylation factor like GTPase 1.
    
 0.981
gcc1
GRIP and coiled-coil domain containing 1.
    
 0.841
GCC2
GRIP and coiled-coil domain containing 2.
   
 
 0.759
LOC114767306
Uncharacterized LOC114767306.
    
  0.758
tmf1
TATA element modulatory factor 1.
   
 
 0.727
ENSDCDP00000028114
annotation not available
    
 0.721
LOC114784733
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
    
  0.706
vrk1
VRK serine/threonine kinase 1.
    
 0.697
vrk2
VRK serine/threonine kinase 2.
    
 0.697
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.696
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.