STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114787960RNA-binding Raly-like protein. (263 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.900
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.864
LOC114786927
Heterogeneous nuclear ribonucleoprotein K-like.
   
 0.859
rbmx
RNA binding motif protein X-linked.
   
0.825
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.808
LOC114793911
Heterogeneous nuclear ribonucleoprotein C-like.
  
0.794
LOC114788367
Heterogeneous nuclear ribonucleoprotein C-like.
  
0.794
ENSDCDP00000029575
Zgc:55733.
   
0.789
sf3b1
Splicing factor 3b subunit 1.
   
 0.716
ENSDCDP00000016359
annotation not available
    
 0.706
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.