STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dtx3Deltex E3 ubiquitin ligase 3. (376 aa)    
Predicted Functional Partners:
parp14
poly(ADP-ribose) polymerase family member 14.
   
 
 0.905
LOC114793516
Neurogenic locus notch homolog protein 2-like.
    
 0.886
LOC114768835
Neurogenic locus notch homolog protein 2-like.
    
 0.886
LOC114799220
Neurogenic locus notch homolog protein 1-like.
    
 0.868
LOC114785412
Neurogenic locus notch homolog protein 1-like.
    
 0.868
eys
Eyes shut homolog.
    
  0.820
ENSDCDP00000022119
annotation not available
  
  
 
0.811
LOC114774403
Protein FAM162B-like.
   
 
 0.793
ENSDCDP00000022257
annotation not available
   
 
 0.793
ENSDCDP00000022263
annotation not available
   
 
 0.793
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.