STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSDCDP00000018939annotation not available (177 aa)    
Predicted Functional Partners:
kansl3
KAT8 regulatory NSL complex subunit 3.
    
  0.927
LOC114797634
KAT8 regulatory NSL complex subunit 2-like.
    
  0.922
fancm
FA complementation group M.
    
 0.918
mcrs1
Microspherule protein 1.
    
  0.905
yeats2
YEATS domain containing 2.
    
  0.867
trrap
Transformation/transcription domain associated protein.
    
  0.858
yeats4
YEATS domain containing 4.
     
 0.856
LOC114796909
KAT8 regulatory NSL complex subunit 1-like.
   
  0.838
kansl1
KAT8 regulatory NSL complex subunit 1.
   
  0.838
kansl1l
KAT8 regulatory NSL complex subunit 1 like.
   
  0.838
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.