STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmpk2Cytidine/uridine monophosphate kinase 2. (416 aa)    
Predicted Functional Partners:
rsad2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.954
rrm1
Ribonucleotide reductase catalytic subunit M1.
  
 
 0.951
CMPK1
Cytidine/uridine monophosphate kinase 1.
    
 0.950
ak9
Adenylate kinase 9.
    
 0.950
umps
Uridine monophosphate synthetase.
  
 
 0.942
tyms
Thymidylate synthetase.
  
 
 0.937
tk1
Thymidine kinase 1.
  
 
 0.935
LOC114796668
Thioredoxin domain-containing protein 3 homolog.
    
 0.928
gart
annotation not available
  
  
 0.921
dctd
dCMP deaminase.
    
 0.920
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.