STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iqckIQ motif containing K. (291 aa)    
Predicted Functional Partners:
slc49a4
Solute carrier family 49 member 4.
      
 0.565
ENSDCDP00000010106
EF-hand calcium binding domain 11.
      
 0.469
idh2
Isocitrate dehydrogenase (NADP(+)) 2.
      
 0.450
idh1
Isocitrate dehydrogenase (NADP(+)) 1.
      
 0.450
LOC114788312
Sorting nexin-9-like.
      
 0.447
LOC114763395
Sorting nexin-9-like.
      
 0.447
plk4
Polo like kinase 4.
      
 0.441
slitrk6
SLIT and NTRK like family member 6.
      
 0.439
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.