STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114797285ETS translocation variant 5-like. (511 aa)    
Predicted Functional Partners:
cop1
COP1 E3 ubiquitin ligase.
    
 
 0.720
stk40
Serine/threonine kinase 40.
    
   0.691
det1
DET1 partner of COP1 E3 ubiquitin ligase.
    
 
 0.683
ENSDCDP00000002138
annotation not available
    
 0.619
ENSDCDP00000002498
annotation not available
    
 0.619
srf
Serum response factor.
    
 0.619
LOC114789889
Runt-related transcription factor 1-like.
   
 0.611
LOC114784585
Runt-related transcription factor 3-like.
   
 0.611
runx2
RUNX family transcription factor 2.
   
 0.611
LOC114763406
Runt-related transcription factor 2-like.
   
 0.611
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.