STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyroxd2Pyridine nucleotide-disulphide oxidoreductase domain 2. (761 aa)    
Predicted Functional Partners:
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.970
ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
  
 
 0.958
fads2
Fatty acid desaturase 2.
    
 0.863
coq2
Coenzyme Q2, polyprenyltransferase.
  
 
 0.831
ppox
Protoporphyrinogen oxidase.
  
 
 0.819
ENSDCDP00000052395
annotation not available
    
 0.801
bckdha
Branched chain keto acid dehydrogenase E1 subunit alpha.
    
 0.783
gale
UDP-galactose-4-epimerase.
    
  0.782
kmo
Kynurenine 3-monooxygenase.
  
 
 0.764
alg5
ALG5 dolichyl-phosphate beta-glucosyltransferase.
    
 0.736
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.