STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114795460Male-specific lethal 1 homolog. (500 aa)    
Predicted Functional Partners:
msl2
MSL complex subunit 2.
    
 0.990
MSL3
MSL complex subunit 3.
    
 0.981
MSL3-2
MSL complex subunit 3.
    
 0.981
LOC114788043
E3 ubiquitin-protein ligase MSL2-like.
    
 0.981
kat8
Lysine acetyltransferase 8.
    
 0.958
kat5
Lysine acetyltransferase 5.
    
 0.958
dhx9
DExH-box helicase 9.
   
 0.949
wdr5
WD repeat domain 5.
   
 0.894
kansl3
KAT8 regulatory NSL complex subunit 3.
     
 0.892
LOC114797634
KAT8 regulatory NSL complex subunit 2-like.
    
 0.889
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.