STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114793157Ubiquitin carboxyl-terminal hydrolase CYLD-like. (941 aa)    
Predicted Functional Partners:
ripk1
Receptor interacting serine/threonine kinase 1.
    
 0.972
tnfrsf1a
TNF receptor superfamily member 1A.
    
 0.970
traf6
TNF receptor associated factor 6.
    
 0.961
ENSDCDP00000038449
annotation not available
   
 0.958
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.957
LOC114785883
ubiquitin-40S ribosomal protein S27a-like.
   
  0.937
LOC114795326
ubiquitin-40S ribosomal protein S27a.
   
  0.937
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.929
tbk1
TANK binding kinase 1.
   
 0.912
LOC114791087
B-cell lymphoma 3 protein homolog.
    
 0.910
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.