STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114766990Neuropilin and tolloid-like protein 2. (509 aa)    
Predicted Functional Partners:
lgi2
Leucine rich repeat LGI family member 2.
      
 0.465
kars1
lysyl-tRNA synthetase 1.
      
 0.450
grik4
Glutamate ionotropic receptor kainate type subunit 4.
   
 0.448
cfap299
Cilia and flagella associated protein 299.
   
 0.448
grik5
Glutamate ionotropic receptor kainate type subunit 5.
   
 0.448
grik1
Glutamate ionotropic receptor kainate type subunit 1.
   
 0.448
GRIK2
Glutamate receptor ionotropic, kainate 2.
   
 0.448
GRIK3
Glutamate receptor ionotropic, kainate 3-like.
   
 0.448
LOC114770063
Glutamate receptor ionotropic, kainate 5-like.
   
 0.448
LOC114791886
Glutamate receptor ionotropic, kainate 1-like.
   
 0.448
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.