STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114769926Zinc finger and BTB domain-containing protein 12-like. (569 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.632
LOC114795515
BTB/POZ domain-containing protein KCTD5-like.
    
 0.628
mysm1
Myb like, SWIRM and MPN domains 1.
   
  0.589
ak9
Adenylate kinase 9.
    
  0.580
LOC114796668
Thioredoxin domain-containing protein 3 homolog.
    
 0.577
ENSDCDP00000054111
annotation not available
    
  0.568
ENSDCDP00000054113
annotation not available
    
  0.568
gtf3c3
General transcription factor IIIC subunit 3.
   
 0.547
YTHDC2
YTH domain containing 2.
   
  0.540
sgk3
Serum/glucocorticoid regulated kinase family member 3.
    
  0.521
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.