STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bckdkBranched chain keto acid dehydrogenase kinase. (412 aa)    
Predicted Functional Partners:
map3k4
Mitogen-activated protein kinase kinase kinase 4.
    
 0.902
DLST
Dihydrolipoamide S-succinyltransferase.
   
 0.876
bckdha
Branched chain keto acid dehydrogenase E1 subunit alpha.
   
 0.864
dlat
Dihydrolipoamide S-acetyltransferase.
   
 0.851
pdhb
Pyruvate dehydrogenase E1 beta subunit.
    
 0.851
pdhx
Pyruvate dehydrogenase complex component X.
   
 0.851
dld
Dihydrolipoamide dehydrogenase.
   
 0.848
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
    
 0.848
LOC114792914
tenascin-N-like.
     
 0.830
LOC114788432
tenascin-R-like.
     
 0.830
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.