STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114779020Disco-interacting protein 2 homolog B-A-like. (1638 aa)    
Predicted Functional Partners:
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.911
coasy
Coenzyme A synthase.
  
 
 0.882
LOC114785655
Uncharacterized LOC114785655.
  
 0.880
ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
  
 0.880
nup93
Nucleoporin 93.
   
 0.852
LOC114766586
Nuclear pore complex protein Nup205-like.
   
 0.850
nup155
Nucleoporin 155.
   
 0.845
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.844
LOC114796491
E3 SUMO-protein ligase RanBP2-like.
   
 0.814
med18
Mediator complex subunit 18.
   
 0.780
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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