STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114801193Vacuolar fusion protein MON1 homolog B-like. (596 aa)    
Predicted Functional Partners:
vps41
VPS41 subunit of HOPS complex.
    
 
 0.928
rmc1
Regulator of MON1-CCZ1.
    
 0.914
ENSDCDP00000005494
annotation not available
    
 0.824
ENSDCDP00000016829
annotation not available
    
 0.824
RAB9A
RAB9A, member RAS oncogene family.
    
 0.824
LOC114800903
Ras-related protein rab7-like.
    
 0.824
LOC114768327
Ras-related protein Rab-9B-like.
    
 0.824
chga
Chromogranin A.
    
 0.812
LOC114799784
Ras-related protein rab7-like.
    
 0.807
LOC114801188
Ras-related protein rab7.
    
 0.807
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.