STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114788609Receptor-type tyrosine-protein phosphatase S-like. (1936 aa)    
Predicted Functional Partners:
LOC114797402
Interleukin-1 receptor accessory protein-like 1-A.
   
 0.875
SLITRK1
SLIT and NTRK like family member 1.
   
 0.832
ENSDCDP00000026727
annotation not available
    
 0.816
LOC114769185
Interleukin-1 receptor accessory protein-like.
    
 0.816
ntrk3
Neurotrophic receptor tyrosine kinase 3.
   
 0.801
LOC114766652
NT-3 growth factor receptor-like.
   
 0.801
LOC114767234
NT-3 growth factor receptor-like.
   
 0.801
slitrk2
SLIT and NTRK like family member 2.
   
 0.798
lrfn5
Leucine rich repeat and fibronectin type III domain containing 5.
   
 0.740
LOC114763795
Leucine-rich repeat and fibronectin type-III domain-containing protein 5-like.
   
 0.740
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.