STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgals9Galectin 9. (363 aa)    
Predicted Functional Partners:
ENSDCDP00000055079
Hepatitis A virus cellular receptor 2.
    
 0.885
usp18
Ubiquitin specific peptidase 18.
   
  
 0.800
rsad2
Radical S-adenosyl methionine domain containing 2.
   
 
 0.722
pbk
PDZ binding kinase.
    
   0.664
ENSDCDP00000055889
annotation not available
   
 
 0.654
PTPRC
Protein tyrosine phosphatase receptor type C.
   
 
 0.629
LOC114789148
Galectin-3-like.
  
 
 
0.575
ENSDCDP00000023414
annotation not available
   
  
 0.568
ENSDCDP00000035453
annotation not available
      
 0.566
slc38a9
Solute carrier family 38 member 9.
    
 
 0.554
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.