STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114783314Junctophilin-1-like. (691 aa)    
Predicted Functional Partners:
LOC114798592
Junctophilin-2-like.
  
  
 
0.862
jph3
Junctophilin 3.
  
  
 
0.750
ENSDCDP00000042919
Si:ch211-146m13.3.
  
  
 
0.745
LOC114789142
Junctophilin-1-like.
  
  
 
0.727
rabgef1
RAB guanine nucleotide exchange factor 1.
   
 0.713
LOC114800108
Rab5 GDP/GTP exchange factor-like.
   
 0.713
ENSDCDP00000012603
annotation not available
   
 0.713
ENSDCDP00000008400
annotation not available
   
 
 0.553
cacna1f
Calcium voltage-gated channel subunit alpha1 F.
   
 
 0.553
LOC114800487
Dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like.
   
 
 0.553
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.