STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114796163Uncharacterized LOC114796163. (2577 aa)    
Predicted Functional Partners:
lrguk
Leucine rich repeats and guanylate kinase domain containing.
   
   0.695
dnajc10
DnaJ heat shock protein family (Hsp40) member C10.
    
 0.541
pdia2
Protein disulfide isomerase family A member 2.
    
 0.537
LOC114785488
Protein disulfide-isomerase-like.
    
 0.537
LOC114777754
Protein disulfide-isomerase-like.
    
 0.537
secisbp2
SECIS binding protein 2.
    
 0.537
p4hb
Prolyl 4-hydroxylase subunit beta.
    
 0.537
LOC114769981
Protein disulfide-isomerase A3-like.
    
 0.537
pdia3
Protein disulfide isomerase family A member 3.
    
 0.537
txndc11
Thioredoxin domain containing 11.
    
 0.537
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.