STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114789667Flotillin-1-like. (428 aa)    
Predicted Functional Partners:
sorbs1
Sorbin and SH3 domain containing 1.
    
 0.859
hspa5
Heat shock protein family A (Hsp70) member 5.
     
 0.774
atp5f1a
ATP synthase F1 subunit alpha.
    
 0.763
cops5
COP9 signalosome subunit 5.
   
  0.758
stoml2
Stomatin like 2.
    
 0.755
COPS6
COP9 signalosome subunit 6.
   
  0.747
ENSDCDP00000048450
annotation not available
    
 0.729
LOC114801975
Flotillin-2.
  
  
 
0.688
LOC114791878
Flotillin-2a.
  
  
 
0.687
ppp1r42
Protein phosphatase 1 regulatory subunit 42.
   
  0.687
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.