STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114769466FYN-binding protein 1-like. (538 aa)    
Predicted Functional Partners:
LOC114795384
Non-structural maintenance of chromosomes element 4 homolog A-like.
   
 0.985
nsmce1
NSE1 homolog, SMC5-SMC6 complex component.
    
 0.984
nsmce2
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
    
 0.983
smc6
Structural maintenance of chromosomes 6.
   
 0.983
smc5
Structural maintenance of chromosomes 5.
   
 0.983
ankfy1
Ankyrin repeat and FYVE domain containing 1.
    
  0.930
LOC114796491
E3 SUMO-protein ligase RanBP2-like.
   
 0.920
smc3
Structural maintenance of chromosomes 3.
    
 0.864
LOC114794090
Tumor necrosis factor receptor superfamily member 16-like.
    
 0.824
ENSDCDP00000018299
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
 0.824
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.