STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114793489Myelin P2 protein-like. (134 aa)    
Predicted Functional Partners:
fabp6
Fatty acid binding protein 6.
   
 
 0.697
fabp2
Fatty acid binding protein 2.
     
 0.650
LOC114794119
Fatty acid-binding protein, liver-like.
     
 0.577
LOC114800838
Peroxisome proliferator-activated receptor delta-like.
    
 0.509
ppard
Peroxisome proliferator activated receptor delta.
    
 0.509
ENSDCDP00000028859
annotation not available
     
 0.504
LOC114786497
Fatty acid-binding protein, liver-type-like.
     
 0.504
LOC114786496
Fatty acid-binding protein, liver-type-like.
     
 0.504
ENSDCDP00000046096
Fatty acid binding protein 1b, tandem duplicate 1.
     
 0.504
lipe
Lipase E, hormone sensitive type.
   
 0.501
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.