STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX22T-box transcription factor TBX22-like. (467 aa)    
Predicted Functional Partners:
LOC114784701
Regulator of G-protein signaling 9-binding protein B-like.
   
    0.760
rgs9bp
Regulator of G protein signaling 9 binding protein.
   
    0.760
dr1
Down-regulator of transcription 1.
     
 0.711
clpp
Caseinolytic mitochondrial matrix peptidase proteolytic subunit.
      
 0.566
CLPS
Colipase.
      
 0.566
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
      
 0.515
barx1
BARX homeobox 1.
   
 
 0.506
meox2
Mesenchyme homeobox 2.
    
 
 0.467
clpx
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
      
 0.463
LOC114766986
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial.
      
 0.463
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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