STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fancmFA complementation group M. (1977 aa)    
Predicted Functional Partners:
ercc1
ERCC excision repair 1, endonuclease non-catalytic subunit.
   
 0.999
fancc
FA complementation group C.
   
 0.999
top3a
DNA topoisomerase III alpha.
   
 0.999
rmi1
RecQ mediated genome instability 1.
    
 0.999
fancg
FA complementation group G.
    
 0.999
recql5
RecQ like helicase 5.
   
 0.999
blm
BLM RecQ like helicase.
   
 0.999
tdrd3
Tudor domain containing 3.
    
 0.999
LOC114783355
Fanconi anemia core complex-associated protein 100-like.
   
 0.999
LOC114783378
Fanconi anemia core complex-associated protein 100-like.
   
 0.999
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.