STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114788115Rho GTPase-activating protein 45-like. (1080 aa)    
Predicted Functional Partners:
LOC114797870
Cell division control protein 42 homolog.
   
 0.616
CDC42
Cell division control protein 42 homolog.
   
 0.616
LOC114791171
Cell division control protein 42 homolog.
   
 0.576
LOC114770125
Cell division control protein 42 homolog.
   
 0.576
LOC114793700
Ras-related C3 botulinum toxin substrate 1.
   
 0.552
LOC114793766
Ras-related C3 botulinum toxin substrate 2.
   
 0.552
LOC114795458
Ras-related C3 botulinum toxin substrate 1-like.
   
 0.552
rac3
Rac family small GTPase 3.
   
 0.552
LOC114784896
Ras-related C3 botulinum toxin substrate 3.
   
 0.552
rhob
Ras homolog family member B.
    
 0.544
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.