STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppcdcPhosphopantothenoylcysteine decarboxylase. (233 aa)    
Predicted Functional Partners:
coasy
Coenzyme A synthase.
  
 0.977
ppcs
Phosphopantothenoylcysteine synthetase.
    
 0.948
pank4
Pantothenate kinase 4 (inactive).
     
 0.941
pank2
Pantothenate kinase 2.
     
 0.939
dcakd
dephospho-CoA kinase domain containing.
   
 0.922
mlx
MAX dimerization protein MLX.
     
 0.922
mthfr
Methylenetetrahydrofolate reductase.
    
 0.905
fpgs
Folylpolyglutamate synthase.
    
 0.902
hlcs
Holocarboxylase synthetase.
  
 
 0.896
slc25a42
Solute carrier family 25 member 42.
  
 
 0.882
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.