STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gid8GID complex subunit 8 homolog. (229 aa)    
Predicted Functional Partners:
armc8
Armadillo repeat containing 8.
    
 0.990
rmnd5a
Required for meiotic nuclear division 5 homolog A.
    
 0.983
ranbp9
RAN binding protein 9.
   
0.981
ranbp10
RAN binding protein 10.
   
0.981
LOC114791066
WD repeat-containing protein 26-like.
    
 0.980
LOC114802878
WD repeat-containing protein 26.
    
 0.980
n4bp3
NEDD4 binding protein 3.
    
 0.980
LOC114772610
Glucose-induced degradation protein 4 homolog.
    
 0.979
GID4
Glucose-induced degradation protein 4 homolog.
    
 0.979
spryd3
SPRY domain containing 3.
   
 0.970
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.