STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114782620Interferon-related developmental regulator 2-like. (432 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
  0.979
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.933
commd2
COMM domain containing 2.
    
 0.908
COMMD10
COMM domain containing 10.
   
 0.893
commd1
Copper metabolism domain containing 1.
    
 0.889
rps6
Ribosomal protein S6.
    
   0.876
rpl18a
Ribosomal protein L18a.
    
 
 0.876
rpl8
Ribosomal protein L8.
    
 
 0.876
rps16
Ribosomal protein S16.
    
   0.875
LOC114785883
ubiquitin-40S ribosomal protein S27a-like.
    
  0.870
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.