STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mvb12aMultivesicular body subunit 12A. (281 aa)    
Predicted Functional Partners:
vps28
VPS28 subunit of ESCRT-I.
   
 0.998
vps37b
VPS37B subunit of ESCRT-I.
   
 0.998
LOC114766884
Ubiquitin-conjugating enzyme E2 variant 3-like.
    
 0.990
vps37c
VPS37C subunit of ESCRT-I.
   
 0.987
vps37a
VPS37A subunit of ESCRT-I.
   
 0.987
LOC114773160
Tumor susceptibility gene 101 protein-like.
    
 0.983
ENSDCDP00000014573
annotation not available
   
 0.983
LOC114774587
Tumor susceptibility gene 101 protein-like.
    
 0.983
tsg101
Tumor susceptibility 101.
    
 0.983
LOC114780403
Vacuolar protein sorting-associated protein 37D-like.
   
 0.980
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.