STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem159Transmembrane protein 159. (152 aa)    
Predicted Functional Partners:
LOC114799487
BTB/POZ domain-containing protein KCTD9.
      
 0.469
LOC114786236
BTB/POZ domain-containing protein KCTD9-like.
      
 0.469
cacfd1
Calcium channel flower domain containing 1.
    
   0.465
crim1
Cysteine rich transmembrane BMP regulator 1.
      
 0.437
ENSDCDP00000045546
annotation not available
      
 0.437
LOC114792328
Seipin-like.
      
 0.403
LOC114782465
Seipin-like.
      
 0.403
LOC114782466
Seipin-like.
      
 0.403
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.