STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114794982Transmembrane protein 180-like. (463 aa)    
Predicted Functional Partners:
mboat2
Membrane bound O-acyltransferase domain containing 2.
   
 0.640
LOC114802862
Membrane-bound O-acyltransferase domain-containing protein 2-like.
   
 0.640
LOC114802864
Membrane-bound O-acyltransferase domain-containing protein 2-like.
   
 0.640
LOC114785655
Uncharacterized LOC114785655.
   
 0.622
ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
   
 0.622
aasdh
Aminoadipate-semialdehyde dehydrogenase.
     
 0.585
psat1
Phosphoserine aminotransferase 1.
    
 0.578
shmt1
Serine hydroxymethyltransferase 1.
    
 0.577
shmt2
Serine hydroxymethyltransferase 2.
    
 0.577
LOC114799992
Glycerol-3-phosphate acyltransferase 2, mitochondrial-like.
  
 
 0.576
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.