STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc124Coiled-coil domain containing 124. (219 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
   0.993
rps19
Ribosomal protein S19.
   
 
 0.959
ENSDCDP00000032355
Ribosomal protein S15.
   
   0.951
rpl11
Ribosomal protein L11.
    
 
 0.950
LOC114787164
40S ribosomal protein SA.
   
   0.949
rps21
Ribosomal protein S21.
   
   0.949
rpl8
Ribosomal protein L8.
   
 
 0.949
rpl5
Ribosomal protein L5.
   
 
 0.948
rps6
Ribosomal protein S6.
   
   0.947
rps11
Ribosomal protein S11.
   
   0.947
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.