STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
anxa4Annexin A4. (345 aa)    
Predicted Functional Partners:
anxa2
Annexin A2.
  
0.775
LOC114770246
Protein S100-A1-like.
   
 0.757
LOC114784911
Neuroblast differentiation-associated protein AHNAK-like.
    
 0.712
cdk9
Cyclin dependent kinase 9.
   
  0.608
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.600
ENSDCDP00000021140
annotation not available
    
 0.600
ENSDCDP00000041533
annotation not available
    
 0.600
ENSDCDP00000030281
annotation not available
    
  0.569
LOC114764375
Kalirin-like.
    
  0.569
trio
Trio Rho guanine nucleotide exchange factor.
    
  0.569
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.