STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usp20Ubiquitin specific peptidase 20. (922 aa)    
Predicted Functional Partners:
ENSDCDP00000038449
annotation not available
    
 0.752
adrb1
Adrenoceptor beta 1.
    
 0.739
LOC114767937
Beta-2 adrenergic receptor-like.
    
 0.739
LOC114792907
Beta-2 adrenergic receptor-like.
    
 0.739
mrps9
Mitochondrial ribosomal protein S9.
   
 
 0.735
traf6
TNF receptor associated factor 6.
    
 0.732
mrps14
Mitochondrial ribosomal protein S14.
    
 0.724
LOC114786537
Uncharacterized LOC114786537.
    
 0.721
LOC114794115
Centriolar coiled-coil protein of 110 kDa-like.
    
 0.721
rps2
Ribosomal protein S2.
    
 
 0.719
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.