STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTOP1Otopetrin 1. (600 aa)    
Predicted Functional Partners:
ENSDCDP00000034390
annotation not available
      
 0.566
ENSDCDP00000042364
Otolin 1b.
      
 0.553
slc30a4
Solute carrier family 30 member 4.
   
  
 0.546
drd2
Dopamine receptor D2.
      
 0.489
drd3
Dopamine receptor D3.
      
 0.489
tecta
Tectorin alpha.
     
 0.461
ngb
Neuroglobin.
      
 0.461
sparc
Secreted protein acidic and cysteine rich.
      
 0.461
tmem128
Transmembrane protein 128.
      
 0.457
LOC114785404
Multidrug resistance-associated protein 1-like.
     
 0.454
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.