STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps12Ribosomal protein S12. (132 aa)    
Predicted Functional Partners:
LOC114791825
40S ribosomal protein S25.
   
 0.999
rpl37a
Ribosomal protein L37a.
   
 
 0.999
rps9
Ribosomal protein S9.
  
 0.999
rpl18
Ribosomal protein L18.
  
 0.999
LOC114787164
40S ribosomal protein SA.
  
 0.999
rps6
Ribosomal protein S6.
  
 0.999
rpl6
Ribosomal protein L6.
  
 0.999
LOC114789050
40S ribosomal protein S28-like.
  
 0.999
rps4x
Ribosomal protein S4 X-linked.
   
 0.999
rpl13a
Ribosomal protein L13a.
  
 0.999
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.