STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdap2Ganglioside induced differentiation associated protein 2. (498 aa)    
Predicted Functional Partners:
akt1s1
AKT1 substrate 1.
   
    0.760
LOC114795208
Core histone macro-H2A.2.
  
 
 
 0.568
LOC114797304
Immunoglobulin superfamily member 3-like.
      
 0.566
wdr3
WD repeat domain 3.
      
 0.566
aifm1
Apoptosis inducing factor mitochondria associated 1.
  
 0.555
hdac11
Histone deacetylase 11.
  
 0.550
hdac8
Histone deacetylase 8.
   
  0.499
HDAC2
Histone deacetylase 2.
   
  0.499
hdac1
Histone deacetylase 1.
   
  0.499
hdac3
Histone deacetylase 3.
   
  0.499
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.