STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35e4Solute carrier family 35 member E4. (383 aa)    
Predicted Functional Partners:
TGDS
TDP-glucose 4,6-dehydratase.
   
 
 0.507
LOC114767888
F-box/WD repeat-containing protein 11.
   
 
  0.484
fbxw11
F-box and WD repeat domain containing 11.
   
 
  0.484
tmem121b
Transmembrane protein 121B.
      
 0.465
LOC114797349
P53-induced death domain-containing protein 1-like.
    
  0.458
pidd1
P53-induced death domain protein 1.
    
  0.458
slc35c1
Solute carrier family 35 member C1.
      
 0.416
slc7a4
Solute carrier family 7 member 4.
      
 0.406
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.