STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114768390Tumor necrosis factor ligand superfamily member 6-like. (229 aa)    
Predicted Functional Partners:
ENSDCDP00000039621
annotation not available
   
 0.968
LOC114769175
Tumor necrosis factor ligand superfamily member 6-like.
   
 
0.934
LOC114798694
Tumor necrosis factor receptor superfamily member 6B-like.
   
 0.932
ENSDCDP00000032484
annotation not available
   
 0.932
ENSDCDP00000017672
annotation not available
   
 0.924
LOC114796000
Tumor necrosis factor receptor superfamily member 6-like.
   
 
 0.919
LOC114790883
Tumor necrosis factor receptor superfamily member 5-like.
   
 0.903
LOC114799170
Tenascin-like.
    
   0.878
LOC114786925
Tenascin-like.
    
   0.878
LOC114792914
tenascin-N-like.
    
   0.865
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.