STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114769057Extracellular calcium-sensing receptor-like. (846 aa)    
Predicted Functional Partners:
LOC114796668
Thioredoxin domain-containing protein 3 homolog.
    
 0.606
gng13
G protein subunit gamma 13.
    
 0.597
LOC114798792
Guanine nucleotide-binding protein G(t) subunit alpha-2-like.
    
 0.549
LOC114773139
Guanine nucleotide-binding protein G(t) subunit alpha-2-like.
    
 0.549
gnat1
G protein subunit alpha transducin 1.
    
 0.549
LOC114801965
Guanine nucleotide-binding protein subunit beta-4.
    
  0.535
LOC114786929
Guanine nucleotide-binding protein G(q) subunit alpha.
    
 0.535
LOC114786036
Inactive tyrosine-protein kinase 7-like.
    
  0.535
LOC114798884
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.
    
  0.535
LOC114800733
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like.
    
  0.535
Your Current Organism:
Denticeps clupeoides
NCBI taxonomy Id: 299321
Other names: D. clupeoides, denticle herring
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